Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm15197-201ENSMUST00000120526 478 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm3828-201ENSMUST00000121817 257 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm19015-201ENSMUST00000184002 1189 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm27953-201ENSMUST00000185171 143 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm43163-201ENSMUST00000196571 442 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 AC134248.1-201ENSMUST00000216113 1176 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Id2-203ENSMUST00000222667 958 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Spcs1-203ENSMUST00000226374 592 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm25580-201ENSMUST00000083409 327 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm9387-201ENSMUST00000098624 1320 ntBASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nhlrc3Q8CCH2 Gm45797-201ENSMUST00000212759 1921 ntBASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 AC158355.1-201ENSMUST00000215895 1705 ntBASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Gm29101-201ENSMUST00000188329 1471 ntBASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Gm9062-201ENSMUST00000117712 727 ntBASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Gm11952-201ENSMUST00000121172 821 ntBASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Gm10051-201ENSMUST00000145209 414 ntBASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nhlrc3Q8CCH2 Gm25661-201ENSMUST00000157704 296 ntBASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms