Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm9133-201ENSMUST00000118289 540 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm12906-201ENSMUST00000154610 441 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm28746-201ENSMUST00000187453 380 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Platr10-202ENSMUST00000191479 818 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm38321-201ENSMUST00000195053 235 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm43752-201ENSMUST00000198475 697 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm5340-201ENSMUST00000203733 880 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.45□□□□□ -0.42
Vps53Q8CCB4 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm9372-201ENSMUST00000168454 430 ntBASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm45085-201ENSMUST00000209100 441 ntBASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm9487-201ENSMUST00000216600 472 ntBASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.44□□□□□ -0.42
Vps53Q8CCB4 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.44□□□□□ -0.42
Vps53Q8CCB4 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps53Q8CCB4 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms