Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Gm14665-201ENSMUST00000122294 557 ntBASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Gm8181-201ENSMUST00000062242 669 ntBASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Gm5805-201ENSMUST00000072779 456 ntBASIC10.96□□□□□ -0.65
Trub1Q8C0D0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trub1Q8C0D0 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm18733-202ENSMUST00000174447 401 ntBASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm24809-201ENSMUST00000175318 271 ntBASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm23153-201ENSMUST00000175323 313 ntBASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm37020-201ENSMUST00000195303 992 ntBASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trub1Q8C0D0 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms