Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm12389-201ENSMUST00000117696 418 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm7985-201ENSMUST00000183329 981 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm38210-201ENSMUST00000191944 809 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm2594-201ENSMUST00000214774 742 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Syne3Q4FZC9 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Mir7032-201ENSMUST00000185154 79 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Gm37028-201ENSMUST00000194276 107 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Gm3793-201ENSMUST00000204973 672 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Gm3619-201ENSMUST00000219947 775 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Gm7589-201ENSMUST00000085631 534 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Syne3Q4FZC9 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC11.3□□□□□ -0.6
Syne3Q4FZC9 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Syne3Q4FZC9 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms