Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Gm7445-201ENSMUST00000192115 340 ntBASIC10.87□□□□□ -0.67
Ebf1Q07802 Gm33080-201ENSMUST00000205429 172 ntBASIC10.87□□□□□ -0.67
Ebf1Q07802 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.87□□□□□ -0.67
Ebf1Q07802 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.87□□□□□ -0.67
Ebf1Q07802 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ebf1Q07802 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ebf1Q07802 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.87□□□□□ -0.67
Ebf1Q07802 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Mir1893-201ENSMUST00000122565 83 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Gm16305-201ENSMUST00000140747 556 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Platr10-202ENSMUST00000191479 818 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.86□□□□□ -0.67
Ebf1Q07802 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf1Q07802 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Ebf1Q07802 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm17836-201ENSMUST00000191976 1302 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms