Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Gm37052-201ENSMUST00000194929 1831 ntBASIC8.9□□□□□ -0.98
Npas1P97459 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC8.9□□□□□ -0.98
Npas1P97459 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
Npas1P97459 Gm15515-201ENSMUST00000117827 822 ntBASIC8.9□□□□□ -0.98
Npas1P97459 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Npas1P97459 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC8.9□□□□□ -0.98
Npas1P97459 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Gm24074-201ENSMUST00000158178 260 ntBASIC8.9□□□□□ -0.98
Npas1P97459 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC8.9□□□□□ -0.98
Npas1P97459 Gm42682-201ENSMUST00000198349 1265 ntBASIC8.9□□□□□ -0.98
Npas1P97459 AC166344.1-201ENSMUST00000223745 674 ntBASIC8.9□□□□□ -0.98
Npas1P97459 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Gm9785-201ENSMUST00000062642 1006 ntBASIC8.9□□□□□ -0.98
Npas1P97459 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC8.9□□□□□ -0.98
Npas1P97459 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Zfp385b-201ENSMUST00000090766 2740 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Gm37367-201ENSMUST00000191771 2602 ntBASIC8.9□□□□□ -0.98
Npas1P97459 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Npas1P97459 Hnrnpk-221ENSMUST00000177497 2585 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Npas1P97459 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Npas1P97459 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
Npas1P97459 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Npas1P97459 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Npas1P97459 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Npas1P97459 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Stxbp5l-203ENSMUST00000114780 3476 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Npas1P97459 Scfd2-208ENSMUST00000151474 3834 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Gm5822-201ENSMUST00000161562 1378 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Zfp536-206ENSMUST00000176205 4372 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Wdr89-202ENSMUST00000187307 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Gm14127-201ENSMUST00000117906 678 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC8.89□□□□□ -0.99
Npas1P97459 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
Npas1P97459 Gm15595-201ENSMUST00000120840 961 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC8.89□□□□□ -0.99
Npas1P97459 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Npas1P97459 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Npas1P97459 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Gm12407-201ENSMUST00000180219 324 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Gm44420-201ENSMUST00000203669 490 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Gm7783-201ENSMUST00000204795 781 ntBASIC8.89□□□□□ -0.99
Npas1P97459 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Saa-ps-201ENSMUST00000211148 320 ntBASIC8.89□□□□□ -0.99
Npas1P97459 CT009713.8-202ENSMUST00000224732 385 ntBASIC8.89□□□□□ -0.99
Npas1P97459 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Npas1P97459 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Npas1P97459 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Npas1P97459 Ube2l3-202ENSMUST00000115699 2906 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Npas1P97459 Gm6768-201ENSMUST00000022467 1878 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Aqp7-201ENSMUST00000030136 2527 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Gm33366-201ENSMUST00000195583 3827 ntBASIC8.89□□□□□ -0.99
Npas1P97459 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Npas1P97459 Gm16059-201ENSMUST00000135583 3778 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Npas1P97459 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Npas1P97459 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Npas1P97459 Grm3-201ENSMUST00000004076 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Npas1P97459 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Npas1P97459 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Npas1P97459 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Npas1P97459 Arhgef10l-204ENSMUST00000105797 3507 ntTSL 5 BASIC8.88□□□□□ -0.99
Npas1P97459 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC8.88□□□□□ -0.99
Npas1P97459 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Npas1P97459 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Npas1P97459 Apol7b-201ENSMUST00000089469 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Npas1P97459 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
Npas1P97459 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC8.88□□□□□ -0.99
Npas1P97459 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Npas1P97459 CT009489.1-201ENSMUST00000227740 1893 ntBASIC8.88□□□□□ -0.99
Npas1P97459 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms