Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cxcl12P40224 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cxcl12P40224 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 AC134898.1-201ENSMUST00000223738 1836 ntBASIC10.96□□□□□ -0.65
Cxcl12P40224 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Gm12774-201ENSMUST00000117881 416 ntBASIC10.96□□□□□ -0.65
Cxcl12P40224 Gm11686-201ENSMUST00000122397 333 ntBASIC10.96□□□□□ -0.65
Cxcl12P40224 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cxcl12P40224 Gm23916-201ENSMUST00000158484 399 ntBASIC10.96□□□□□ -0.65
Cxcl12P40224 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Gm24180-201ENSMUST00000179961 110 ntBASIC10.96□□□□□ -0.65
Cxcl12P40224 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC10.96□□□□□ -0.65
Cxcl12P40224 Gm32102-201ENSMUST00000196885 241 ntBASIC10.96□□□□□ -0.65
Cxcl12P40224 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.96□□□□□ -0.65
Cxcl12P40224 AC123533.3-201ENSMUST00000228056 454 ntBASIC10.96□□□□□ -0.65
Cxcl12P40224 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl12P40224 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl12P40224 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl12P40224 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl12P40224 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl12P40224 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl12P40224 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl12P40224 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl12P40224 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.96□□□□□ -0.66
Cxcl12P40224 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl12P40224 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl12P40224 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.96□□□□□ -0.66
Cxcl12P40224 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Dcstamp-205ENSMUST00000228556 1684 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm7823-201ENSMUST00000120761 1623 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm8661-201ENSMUST00000118688 992 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm4996-201ENSMUST00000122042 784 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm14370-201ENSMUST00000122460 868 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm15273-201ENSMUST00000142302 868 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm7023-201ENSMUST00000147295 868 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm14357-201ENSMUST00000178352 868 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm14361-201ENSMUST00000178547 868 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm14348-201ENSMUST00000179183 868 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm6463-201ENSMUST00000182090 966 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 AC163351.1-201ENSMUST00000225539 737 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Cacna2d3-208ENSMUST00000225985 918 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm8991-201ENSMUST00000073014 1075 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Elobl-202ENSMUST00000082339 300 ntBASIC10.95□□□□□ -0.66
Cxcl12P40224 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl12P40224 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cxcl12P40224 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms