Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm42633-201ENSMUST00000198853 2764 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Slc7a9-202ENSMUST00000118383 1869 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nedd8P29595 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Kif23-201ENSMUST00000034815 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Atg14-201ENSMUST00000042988 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm13296-201ENSMUST00000117854 997 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.7□□□□□ -0.86
Nedd8P29595 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm21778-201ENSMUST00000178779 471 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Gm7741-201ENSMUST00000181445 989 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Gm27627-201ENSMUST00000183644 150 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Mir7677-201ENSMUST00000184226 67 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm29396-201ENSMUST00000185659 716 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Gm29067-201ENSMUST00000190821 470 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Gm38002-201ENSMUST00000193255 180 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Gm6266-201ENSMUST00000203844 806 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.7□□□□□ -0.86
Nedd8P29595 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC9.7□□□□□ -0.86
Nedd8P29595 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.7□□□□□ -0.86
Nedd8P29595 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nedd8P29595 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm37446-201ENSMUST00000193015 4136 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm4810-201ENSMUST00000177721 1607 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Glp2r-201ENSMUST00000021289 1738 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.7□□□□□ -0.86
Nedd8P29595 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 AC125351.1-201ENSMUST00000221438 2223 ntBASIC9.7□□□□□ -0.86
Nedd8P29595 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC9.7□□□□□ -0.86
Nedd8P29595 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Rcbtb2-201ENSMUST00000022702 2971 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.69□□□□□ -0.86
Nedd8P29595 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.69□□□□□ -0.86
Nedd8P29595 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.69□□□□□ -0.86
Nedd8P29595 Unc45b-205ENSMUST00000164945 3555 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.69□□□□□ -0.86
Nedd8P29595 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Gm23694-201ENSMUST00000179335 110 ntBASIC9.69□□□□□ -0.86
Nedd8P29595 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.69□□□□□ -0.86
Nedd8P29595 Platr10-202ENSMUST00000191479 818 ntBASIC9.69□□□□□ -0.86
Nedd8P29595 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.69□□□□□ -0.86
Nedd8P29595 Gm43179-201ENSMUST00000198797 275 ntBASIC9.69□□□□□ -0.86
Nedd8P29595 Gm42868-201ENSMUST00000199168 2697 ntBASIC9.69□□□□□ -0.86
Nedd8P29595 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.69□□□□□ -0.86
Nedd8P29595 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.69□□□□□ -0.86
Nedd8P29595 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms