Protein–RNA interactions for Protein: P0CB42

Alkbh1, Nucleic acid dioxygenase ALKBH1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkbh1P0CB42 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Alkbh1P0CB42 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Gm24312-201ENSMUST00000178677 119 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.34□□□□□ -0.59
Alkbh1P0CB42 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Alkbh1P0CB42 AC125351.1-201ENSMUST00000221438 2223 ntBASIC11.33□□□□□ -0.59
Alkbh1P0CB42 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Alkbh1P0CB42 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Mir3547-201ENSMUST00000175461 88 ntBASIC11.33□□□□□ -0.6
Alkbh1P0CB42 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Gm19566-201ENSMUST00000199576 610 ntBASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alkbh1P0CB42 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alkbh1P0CB42 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms