Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm45165-201ENSMUST00000207763 1631 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm23604-201ENSMUST00000104311 132 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Snord23-201ENSMUST00000116828 109 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Platr10-202ENSMUST00000191479 818 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm8234-201ENSMUST00000198523 1107 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm21142-201ENSMUST00000179999 2604 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm23745-201ENSMUST00000104230 125 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm13827-201ENSMUST00000148801 372 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm25343-201ENSMUST00000157460 107 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm24328-201ENSMUST00000175104 67 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm37597-201ENSMUST00000191853 382 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm2448-201ENSMUST00000207080 559 ntBASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
Usf3B2RUQ2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms