Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm10020-201ENSMUST00000081993 612 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm13192-201ENSMUST00000101199 208 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm12947-201ENSMUST00000116114 420 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm15617-201ENSMUST00000118973 771 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm10443-201ENSMUST00000119024 210 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm13624-201ENSMUST00000120263 462 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm13281-201ENSMUST00000120871 567 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm12009-201ENSMUST00000121361 1100 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm19246-201ENSMUST00000173599 255 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm37723-201ENSMUST00000194480 565 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm43564-201ENSMUST00000196185 211 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm20568-201ENSMUST00000197129 208 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm17936-201ENSMUST00000199413 988 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm44605-201ENSMUST00000206892 949 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 AC103672.1-201ENSMUST00000227502 365 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Scrt1Q99M85 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.42□□□□□ -0.9
Scrt1Q99M85 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms