Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Gm12389-201ENSMUST00000117696 418 ntBASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Gm26272-201ENSMUST00000179241 132 ntBASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Gm26976-201ENSMUST00000182929 908 ntBASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Gm9369-201ENSMUST00000196009 733 ntBASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Gm43610-201ENSMUST00000199117 365 ntBASIC12.47□□□□□ -0.41
Vps53Q8CCB4 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Gm18035-201ENSMUST00000211962 589 ntBASIC12.47□□□□□ -0.41
Vps53Q8CCB4 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps53Q8CCB4 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm23612-201ENSMUST00000103823 110 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm25562-201ENSMUST00000104608 133 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm15196-201ENSMUST00000121406 482 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm13981-201ENSMUST00000122360 447 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm17221-201ENSMUST00000163909 481 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm17073-201ENSMUST00000168069 556 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Gm23576-201ENSMUST00000179918 110 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Capsl-202ENSMUST00000226688 739 ntBASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps53Q8CCB4 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.46□□□□□ -0.42
Vps53Q8CCB4 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Vps53Q8CCB4 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps53Q8CCB4 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms