Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm7052-201ENSMUST00000167568 1512 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm15285-201ENSMUST00000119271 473 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm12628-201ENSMUST00000122193 382 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm26943-201ENSMUST00000182295 957 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm7583-201ENSMUST00000182941 1005 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm18463-201ENSMUST00000207258 474 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm18460-201ENSMUST00000208088 464 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm37909-201ENSMUST00000193157 2159 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp44Q8C2S0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm13022-201ENSMUST00000121181 285 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm14113-201ENSMUST00000121399 976 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm23218-201ENSMUST00000158124 276 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm42803-201ENSMUST00000201051 451 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm45745-201ENSMUST00000211447 1180 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp44Q8C2S0 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms