Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm37852-201ENSMUST00000193027 350 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm43564-201ENSMUST00000196185 211 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm43506-201ENSMUST00000200675 753 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm6312-201ENSMUST00000204060 1194 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm29763-201ENSMUST00000205306 616 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm5449-201ENSMUST00000081132 357 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm16518-201ENSMUST00000117960 508 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm11957-201ENSMUST00000118304 779 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm5244-201ENSMUST00000164001 339 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm27956-201ENSMUST00000175604 260 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Mir8111-201ENSMUST00000184463 137 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm6677-201ENSMUST00000195100 441 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm38170-201ENSMUST00000195404 816 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm26782-203ENSMUST00000227103 751 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Pcdh19Q80TF3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms