Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 AA474408-201ENSMUST00000098110 3339 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm13437-201ENSMUST00000122434 1981 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm12990-201ENSMUST00000120372 468 ntBASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm13445-201ENSMUST00000121664 307 ntBASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm25226-201ENSMUST00000158198 123 ntBASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm28746-201ENSMUST00000187453 380 ntBASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm40414-201ENSMUST00000197608 481 ntBASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casc4Q6P2L7 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.83□□□□□ -0.67
Casc4Q6P2L7 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm24248-201ENSMUST00000157321 322 ntBASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm26119-201ENSMUST00000175601 104 ntBASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm7985-201ENSMUST00000183329 981 ntBASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm9487-201ENSMUST00000216600 472 ntBASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.83□□□□□ -0.68
Casc4Q6P2L7 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casc4Q6P2L7 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms