Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm11449-201ENSMUST00000119175 476 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm16459-201ENSMUST00000121443 686 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm5257-201ENSMUST00000121823 790 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm8210-201ENSMUST00000178557 483 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm15454-201ENSMUST00000179718 483 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm5274-201ENSMUST00000182641 1003 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm42433-201ENSMUST00000196806 940 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm19566-201ENSMUST00000199576 610 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm43811-201ENSMUST00000202862 695 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm6344-201ENSMUST00000075962 483 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Atf7-201ENSMUST00000096143 390 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Mir1249-201ENSMUST00000116791 98 ntBASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Gm7928-201ENSMUST00000181249 701 ntBASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Gm42803-201ENSMUST00000201051 451 ntBASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Gm45085-201ENSMUST00000209100 441 ntBASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Gm18204-201ENSMUST00000209835 793 ntBASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.78□□□□□ -0.36
Vps54Q5SPW0 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps54Q5SPW0 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.77□□□□□ -0.36
Vps54Q5SPW0 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps54Q5SPW0 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.77□□□□□ -0.36
Vps54Q5SPW0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vps54Q5SPW0 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.77□□□□□ -0.36
Vps54Q5SPW0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps54Q5SPW0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm8451-201ENSMUST00000170338 447 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm4862-201ENSMUST00000170405 438 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm42780-201ENSMUST00000197083 734 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm2448-201ENSMUST00000207080 559 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm5453-201ENSMUST00000080866 447 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms