Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Gm29543-201ENSMUST00000188138 967 ntBASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Gm45186-201ENSMUST00000206874 478 ntBASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccbe1Q3MI99 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm37583-201ENSMUST00000195460 2487 ntBASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 March1-206ENSMUST00000110256 3288 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Lrrc49-210ENSMUST00000166168 2784 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm12912-201ENSMUST00000121596 1381 ntBASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm13323-201ENSMUST00000120245 1151 ntBASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm22902-201ENSMUST00000158488 302 ntBASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm7940-201ENSMUST00000218195 769 ntBASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Synm-203ENSMUST00000207102 3388 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Ankk1-201ENSMUST00000034792 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccbe1Q3MI99 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccbe1Q3MI99 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms