Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm28905-202ENSMUST00000219328 1377 ntTSL 5 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm33351-202ENSMUST00000215428 1677 ntTSL 5 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm9583-201ENSMUST00000219613 1843 ntBASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm5310-201ENSMUST00000197861 1511 ntBASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm37232-201ENSMUST00000194887 367 ntBASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm40604-201ENSMUST00000217765 655 ntTSL 5 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 AC107369.2-201ENSMUST00000226154 916 ntBASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 AC167234.1-201ENSMUST00000219929 279 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 9530056K15Rik-201ENSMUST00000061947 2315 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Ces1e-203ENSMUST00000176282 1883 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Gm17828-201ENSMUST00000183380 799 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Gm37804-201ENSMUST00000192206 547 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Ngf-204ENSMUST00000198644 1120 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Spz1-201ENSMUST00000050658 1537 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Gzmb-201ENSMUST00000015581 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Gm9516-201ENSMUST00000119684 424 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Gm6285-201ENSMUST00000122012 498 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Gm8696-201ENSMUST00000174777 385 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Gm18471-201ENSMUST00000208272 452 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 AC139130.1-201ENSMUST00000228281 620 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdh23Q99PF4 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Gm43290-201ENSMUST00000200359 1557 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Taar7c-ps-201ENSMUST00000122123 1055 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Mir7115-201ENSMUST00000184275 64 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Olfr1425-201ENSMUST00000087828 939 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Olfr323-203ENSMUST00000214132 1916 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms