Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Gm44540-201ENSMUST00000205640 354 ntBASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Gm8615-201ENSMUST00000025307 771 ntBASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Btrc-209ENSMUST00000224478 2194 ntBASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Gm13777-201ENSMUST00000118208 345 ntBASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Gm12849-201ENSMUST00000120013 739 ntBASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Gm38103-201ENSMUST00000191707 864 ntBASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Gm42859-201ENSMUST00000199572 193 ntBASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-1Q99MA9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Nkx6-1Q99MA9 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms