Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Gm12899-201ENSMUST00000120565 551 ntBASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Gm12030-201ENSMUST00000121917 223 ntBASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Mir1905-201ENSMUST00000122779 82 ntBASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Gm10752-201ENSMUST00000218348 729 ntBASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Gm9139-201ENSMUST00000218817 700 ntBASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim29Q8R2Q0 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim29Q8R2Q0 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.21□□□□□ -0.46
Trim29Q8R2Q0 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim29Q8R2Q0 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim29Q8R2Q0 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.21□□□□□ -0.46
Trim29Q8R2Q0 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim29Q8R2Q0 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim29Q8R2Q0 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim29Q8R2Q0 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm12337-201ENSMUST00000119634 400 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm13937-201ENSMUST00000121000 988 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm8194-201ENSMUST00000159783 859 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm28833-201ENSMUST00000189671 559 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm5100-201ENSMUST00000195631 589 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm42710-201ENSMUST00000200608 985 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm5881-201ENSMUST00000204737 367 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm31941-201ENSMUST00000209689 350 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 AC153524.2-202ENSMUST00000220401 1794 ntBASIC12.2□□□□□ -0.46
Trim29Q8R2Q0 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms