Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm23745-201ENSMUST00000104230 125 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm14274-201ENSMUST00000117182 615 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm15036-201ENSMUST00000118880 400 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm11573-201ENSMUST00000119956 394 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm7985-201ENSMUST00000183329 981 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prpf31Q8CCF0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Gm9507-202ENSMUST00000180157 654 ntBASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Mir6387-201ENSMUST00000184042 108 ntBASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 BC080696-201ENSMUST00000202858 1218 ntBASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prpf31Q8CCF0 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Prpf31Q8CCF0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.7□□□□□ -0.54
Prpf31Q8CCF0 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prpf31Q8CCF0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prpf31Q8CCF0 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.7□□□□□ -0.54
Prpf31Q8CCF0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prpf31Q8CCF0 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prpf31Q8CCF0 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Prpf31Q8CCF0 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prpf31Q8CCF0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms