Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm27441-201ENSMUST00000185000 105 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm37597-201ENSMUST00000191853 382 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm34379-201ENSMUST00000195036 290 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm42660-201ENSMUST00000197733 947 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm30946-201ENSMUST00000198288 724 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Trav11n-201ENSMUST00000200113 343 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm7525-201ENSMUST00000219425 454 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vps53Q8CCB4 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm11957-201ENSMUST00000118304 779 ntBASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm14165-201ENSMUST00000121456 952 ntBASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm25604-201ENSMUST00000158359 133 ntBASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps53Q8CCB4 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms