Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Gm14665-201ENSMUST00000122294 557 ntBASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Gm24248-201ENSMUST00000157321 322 ntBASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Gm37020-201ENSMUST00000195303 992 ntBASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trim9Q8C7M3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm26208-201ENSMUST00000158677 124 ntBASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm18733-202ENSMUST00000174447 401 ntBASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm29787-201ENSMUST00000222129 849 ntBASIC11.74□□□□□ -0.53
Trim9Q8C7M3 AC157650.1-201ENSMUST00000224582 610 ntBASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm26670-202ENSMUST00000226862 340 ntBASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim9Q8C7M3 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms