Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp44Q8C2S0 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 AC144938.1-201ENSMUST00000223994 2167 ntBASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Gm29155-201ENSMUST00000185910 269 ntBASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.46□□□□□ -0.41
Usp44Q8C2S0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Gm44640-201ENSMUST00000206894 247 ntBASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp44Q8C2S0 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.46□□□□□ -0.42
Usp44Q8C2S0 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp44Q8C2S0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm11354-201ENSMUST00000121974 422 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm13981-201ENSMUST00000122360 447 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm22146-201ENSMUST00000157397 288 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm26272-201ENSMUST00000179241 132 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 AC149294.3-201ENSMUST00000226888 732 ntBASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp44Q8C2S0 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms