Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Gm42867-201ENSMUST00000202995 469 ntBASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 AC122408.1-201ENSMUST00000218949 218 ntBASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Gm44926-201ENSMUST00000207898 1826 ntBASIC8.94□□□□□ -0.98
Tsen54Q8C2A2 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm37242-201ENSMUST00000191873 2085 ntBASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm6397-201ENSMUST00000161973 1069 ntBASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Mir3102-201ENSMUST00000175555 104 ntBASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm19353-201ENSMUST00000184561 445 ntBASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm10774-201ENSMUST00000188689 204 ntBASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Ginm1-202ENSMUST00000065124 300 ntBASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm7551-201ENSMUST00000089593 1074 ntBASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gm17980-201ENSMUST00000217977 2349 ntBASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Lrtm1-203ENSMUST00000224760 3060 ntBASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Tsen54Q8C2A2 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms