Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Gm14892-201ENSMUST00000117636 267 ntBASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Gm44304-201ENSMUST00000200509 145 ntBASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm9220-201ENSMUST00000190721 2544 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm11380-201ENSMUST00000118067 560 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm13408-201ENSMUST00000119822 798 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm13935-201ENSMUST00000121859 798 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Mir5120-201ENSMUST00000175020 78 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm18827-201ENSMUST00000188341 790 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm37390-201ENSMUST00000192452 872 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm43520-201ENSMUST00000197996 164 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm39288-201ENSMUST00000210554 446 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.74□□□□□ -0.69
Rad54bQ6PFE3 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm11246-201ENSMUST00000120880 345 ntBASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms