Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rc3h1Q4VGL6 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Gm5801-201ENSMUST00000182247 780 ntBASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Gm43222-201ENSMUST00000199013 603 ntBASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Gm45094-201ENSMUST00000207013 617 ntBASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 AC154616.1-201ENSMUST00000226995 804 ntBASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rc3h1Q4VGL6 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rc3h1Q4VGL6 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms