Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Gm23061-201ENSMUST00000102348 116 ntBASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upf3bQ3ULL6 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm12990-201ENSMUST00000120372 468 ntBASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm8723-201ENSMUST00000166076 820 ntBASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm8701-201ENSMUST00000169259 874 ntBASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm18733-202ENSMUST00000174447 401 ntBASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gm4903-201ENSMUST00000210462 405 ntBASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upf3bQ3ULL6 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms