Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Zfp389-202ENSMUST00000224437 1234 ntBASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 n-R5s5-201ENSMUST00000083134 119 ntBASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm8806-201ENSMUST00000120076 1407 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Trav9n-1-201ENSMUST00000185224 339 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm37486-201ENSMUST00000195663 405 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm42710-201ENSMUST00000200608 985 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm18466-201ENSMUST00000209147 499 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm28653-202ENSMUST00000227082 521 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm42521-201ENSMUST00000199190 2040 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Gm6727-201ENSMUST00000204102 1518 ntBASIC13.85□□□□□ -0.19
Sf3b2Q3UJB0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm14853-201ENSMUST00000116081 549 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm15033-201ENSMUST00000118188 673 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm4996-201ENSMUST00000122042 784 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm24180-201ENSMUST00000179961 110 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm7251-201ENSMUST00000182661 1009 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm6317-201ENSMUST00000183159 1000 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 AC134607.1-201ENSMUST00000214707 485 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 AL844586.1-201ENSMUST00000224297 1042 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 AC134860.5-201ENSMUST00000225071 1249 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 AC165260.3-201ENSMUST00000225101 665 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b2Q3UJB0 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sf3b2Q3UJB0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms