Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim43aQ3TL54 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Gm15604-201ENSMUST00000118350 1456 ntBASIC11.32□□□□□ -0.6
Trim43aQ3TL54 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm11246-201ENSMUST00000120880 345 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm5244-201ENSMUST00000164001 339 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm4654-201ENSMUST00000183305 982 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm29543-201ENSMUST00000188138 967 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm37905-201ENSMUST00000195310 341 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim43aQ3TL54 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Gm15573-201ENSMUST00000119487 540 ntBASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Gm13284-201ENSMUST00000121020 547 ntBASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Gm14665-201ENSMUST00000122294 557 ntBASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Gm44420-201ENSMUST00000203669 490 ntBASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.3□□□□□ -0.6
Trim43aQ3TL54 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.3□□□□□ -0.6
Trim43aQ3TL54 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms