Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
GabpaQ00422 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
GabpaQ00422 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.12□□□□□ -0.47
GabpaQ00422 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Gm18182-201ENSMUST00000191380 1251 ntBASIC12.12□□□□□ -0.47
GabpaQ00422 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
GabpaQ00422 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.12□□□□□ -0.47
GabpaQ00422 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
GabpaQ00422 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
GabpaQ00422 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Gm38034-201ENSMUST00000193915 2069 ntBASIC12.12□□□□□ -0.47
GabpaQ00422 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
GabpaQ00422 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.12□□□□□ -0.47
GabpaQ00422 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
GabpaQ00422 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
GabpaQ00422 Gm13120-201ENSMUST00000117343 1446 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.11□□□□□ -0.47
GabpaQ00422 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.11□□□□□ -0.47
GabpaQ00422 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm13171-201ENSMUST00000117233 391 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Gm11235-201ENSMUST00000117763 333 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Gm14231-201ENSMUST00000120090 592 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Gm6238-201ENSMUST00000120999 465 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm7985-201ENSMUST00000183329 981 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Gm37944-201ENSMUST00000194233 414 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm43752-201ENSMUST00000198475 697 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Gm44304-201ENSMUST00000200509 145 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.11□□□□□ -0.47
GabpaQ00422 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 AC107711.4-201ENSMUST00000228948 440 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
GabpaQ00422 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GabpaQ00422 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
GabpaQ00422 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.11□□□□□ -0.47
GabpaQ00422 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.11□□□□□ -0.47
GabpaQ00422 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.11□□□□□ -0.47
GabpaQ00422 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GabpaQ00422 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GabpaQ00422 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms