Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SgcbP82349 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SgcbP82349 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
SgcbP82349 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SgcbP82349 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SgcbP82349 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Gm25562-201ENSMUST00000104608 133 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC9.65□□□□□ -0.86
SgcbP82349 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Gm12507-201ENSMUST00000119155 415 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.65□□□□□ -0.86
SgcbP82349 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcbP82349 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Mir6958-201ENSMUST00000184207 73 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Gm28455-201ENSMUST00000189105 1290 ntBASIC9.65□□□□□ -0.86
SgcbP82349 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Trbv27-201ENSMUST00000193711 277 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SgcbP82349 Gm37709-201ENSMUST00000195074 600 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Gm18035-201ENSMUST00000211962 589 ntBASIC9.65□□□□□ -0.86
SgcbP82349 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC9.65□□□□□ -0.86
SgcbP82349 AC154252.1-201ENSMUST00000226041 473 ntBASIC9.65□□□□□ -0.86
SgcbP82349 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
SgcbP82349 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
SgcbP82349 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
SgcbP82349 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
SgcbP82349 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcbP82349 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcbP82349 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC9.65□□□□□ -0.86
SgcbP82349 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SgcbP82349 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SgcbP82349 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SgcbP82349 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.65□□□□□ -0.87
SgcbP82349 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SgcbP82349 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SgcbP82349 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SgcbP82349 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SgcbP82349 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.64□□□□□ -0.87
SgcbP82349 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SgcbP82349 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
SgcbP82349 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
SgcbP82349 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.64□□□□□ -0.87
SgcbP82349 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
SgcbP82349 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
SgcbP82349 Gm5909-201ENSMUST00000119768 1281 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.64□□□□□ -0.87
SgcbP82349 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC9.64□□□□□ -0.87
SgcbP82349 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.64□□□□□ -0.87
SgcbP82349 Gm24248-201ENSMUST00000157321 322 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms