Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
SftpbP50405 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Gm9369-201ENSMUST00000196009 733 ntBASIC10.88□□□□□ -0.67
SftpbP50405 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.88□□□□□ -0.67
SftpbP50405 Gm18561-201ENSMUST00000206027 804 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Gm45310-201ENSMUST00000210436 275 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.88□□□□□ -0.67
SftpbP50405 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.88□□□□□ -0.67
SftpbP50405 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.88□□□□□ -0.67
SftpbP50405 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.88□□□□□ -0.67
SftpbP50405 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SftpbP50405 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SftpbP50405 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SftpbP50405 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SftpbP50405 AC158779.1-201ENSMUST00000228912 3861 ntBASIC10.87□□□□□ -0.67
SftpbP50405 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SftpbP50405 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SftpbP50405 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.87□□□□□ -0.67
SftpbP50405 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 B9d1os-201ENSMUST00000137010 674 ntBASIC10.87□□□□□ -0.67
SftpbP50405 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SftpbP50405 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 Gm19927-201ENSMUST00000185792 781 ntBASIC10.87□□□□□ -0.67
SftpbP50405 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.87□□□□□ -0.67
SftpbP50405 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
SftpbP50405 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.87□□□□□ -0.67
SftpbP50405 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SftpbP50405 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SftpbP50405 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.87□□□□□ -0.67
SftpbP50405 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpbP50405 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpbP50405 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC10.87□□□□□ -0.67
SftpbP50405 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SftpbP50405 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SftpbP50405 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SftpbP50405 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SftpbP50405 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.86□□□□□ -0.67
SftpbP50405 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SftpbP50405 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SftpbP50405 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SftpbP50405 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
SftpbP50405 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Gm11331-201ENSMUST00000119764 288 ntBASIC10.86□□□□□ -0.67
SftpbP50405 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms