Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vcam1P29533 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.26□□□□□ -0.45
Vcam1P29533 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Gm6500-201ENSMUST00000119412 451 ntBASIC12.26□□□□□ -0.45
Vcam1P29533 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.26□□□□□ -0.45
Vcam1P29533 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.26□□□□□ -0.45
Vcam1P29533 Gm26174-201ENSMUST00000158415 219 ntBASIC12.26□□□□□ -0.45
Vcam1P29533 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.26□□□□□ -0.45
Vcam1P29533 Gm37390-201ENSMUST00000192452 872 ntBASIC12.26□□□□□ -0.45
Vcam1P29533 Gm44236-201ENSMUST00000204492 513 ntBASIC12.26□□□□□ -0.45
Vcam1P29533 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 AC154461.1-201ENSMUST00000224207 1005 ntBASIC12.26□□□□□ -0.45
Vcam1P29533 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.26□□□□□ -0.45
Vcam1P29533 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vcam1P29533 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vcam1P29533 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vcam1P29533 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vcam1P29533 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.25□□□□□ -0.45
Vcam1P29533 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vcam1P29533 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Gm11473-201ENSMUST00000118980 359 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 Gm6630-201ENSMUST00000119199 454 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Gm11736-201ENSMUST00000121468 505 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Gm17799-201ENSMUST00000183270 667 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.25□□□□□ -0.45
Vcam1P29533 Gm8226-201ENSMUST00000190511 798 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC12.25□□□□□ -0.45
Vcam1P29533 AC163638.2-201ENSMUST00000224920 827 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Gm9701-201ENSMUST00000077976 427 ntBASIC12.25□□□□□ -0.45
Vcam1P29533 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.25□□□□□ -0.45
Vcam1P29533 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vcam1P29533 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vcam1P29533 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vcam1P29533 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Vcam1P29533 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vcam1P29533 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Vcam1P29533 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vcam1P29533 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms