Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rc3h2P0C090 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm15031-201ENSMUST00000121341 210 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm6425-201ENSMUST00000136332 790 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm26313-201ENSMUST00000157770 308 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm9574-201ENSMUST00000173127 845 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm8601-201ENSMUST00000182096 909 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm7572-201ENSMUST00000182616 766 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm27316-201ENSMUST00000184884 277 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm8384-201ENSMUST00000190905 704 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.96□□□□□ -0.65
Rc3h2P0C090 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rc3h2P0C090 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.96□□□□□ -0.66
Rc3h2P0C090 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Lrtm1-203ENSMUST00000224760 3060 ntBASIC10.95□□□□□ -0.66
Rc3h2P0C090 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.95□□□□□ -0.66
Rc3h2P0C090 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.95□□□□□ -0.66
Rc3h2P0C090 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm12950-201ENSMUST00000121683 417 ntBASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm13857-201ENSMUST00000139645 173 ntBASIC10.95□□□□□ -0.66
Rc3h2P0C090 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm37207-201ENSMUST00000194284 296 ntBASIC10.95□□□□□ -0.66
Rc3h2P0C090 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Wbp1-209ENSMUST00000205023 716 ntBASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm18466-201ENSMUST00000209147 499 ntBASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.95□□□□□ -0.66
Rc3h2P0C090 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms