Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Igh-VJ558P01758 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm42858-201ENSMUST00000202512 1704 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm8216-201ENSMUST00000117232 601 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm34023-201ENSMUST00000195539 217 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm31274-201ENSMUST00000197356 229 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm18514-201ENSMUST00000218980 436 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Igh-VJ558P01758 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Igh-VJ558P01758 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms