Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm43522-201ENSMUST00000196697 1922 ntBASIC14.06□□□□□ -0.16
U2af1Q9D883 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC14.06□□□□□ -0.16
U2af1Q9D883 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm15554-201ENSMUST00000120406 913 ntBASIC14.06□□□□□ -0.16
U2af1Q9D883 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
U2af1Q9D883 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm5526-201ENSMUST00000153604 423 ntBASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm25951-201ENSMUST00000175330 64 ntBASIC14.06□□□□□ -0.16
U2af1Q9D883 Mir8111-201ENSMUST00000184463 137 ntBASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm5881-201ENSMUST00000204737 367 ntBASIC14.06□□□□□ -0.16
U2af1Q9D883 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm18204-201ENSMUST00000209835 793 ntBASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC14.06□□□□□ -0.16
U2af1Q9D883 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
U2af1Q9D883 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
U2af1Q9D883 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC14.06□□□□□ -0.16
U2af1Q9D883 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
U2af1Q9D883 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC14.05□□□□□ -0.16
U2af1Q9D883 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
U2af1Q9D883 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm12397-201ENSMUST00000117674 615 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm13857-201ENSMUST00000139645 173 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm26208-201ENSMUST00000158677 124 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
U2af1Q9D883 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm9507-202ENSMUST00000180157 654 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Mir6387-201ENSMUST00000184042 108 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm45745-201ENSMUST00000211447 1180 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC14.05□□□□□ -0.16
U2af1Q9D883 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.05□□□□□ -0.16
U2af1Q9D883 CT025689.1-201ENSMUST00000225214 283 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.05□□□□□ -0.16
U2af1Q9D883 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm12097-201ENSMUST00000121523 1414 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
U2af1Q9D883 Gm10699-201ENSMUST00000098916 2130 ntBASIC14.05□□□□□ -0.16
U2af1Q9D883 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
U2af1Q9D883 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC14.04□□□□□ -0.16
U2af1Q9D883 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC14.04□□□□□ -0.16
U2af1Q9D883 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
U2af1Q9D883 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
U2af1Q9D883 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
U2af1Q9D883 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
U2af1Q9D883 Gm15264-201ENSMUST00000118050 502 ntBASIC14.04□□□□□ -0.16
U2af1Q9D883 Gm16459-201ENSMUST00000121443 686 ntBASIC14.04□□□□□ -0.16
U2af1Q9D883 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC14.04□□□□□ -0.16
U2af1Q9D883 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.04□□□□□ -0.16
U2af1Q9D883 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms