Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 AC158779.1-201ENSMUST00000228912 3861 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm23061-201ENSMUST00000102348 116 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Mir1943-201ENSMUST00000158276 73 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Platr10-202ENSMUST00000191479 818 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm32111-201ENSMUST00000207689 846 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm18042-201ENSMUST00000219887 790 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp4cQ9D7F7 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Gm42859-201ENSMUST00000199572 193 ntBASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Gm43671-201ENSMUST00000200422 433 ntBASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Gm19091-201ENSMUST00000208120 978 ntBASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms