Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf135Q9CWS1 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf135Q9CWS1 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf135Q9CWS1 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf135Q9CWS1 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf135Q9CWS1 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf135Q9CWS1 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rnf135Q9CWS1 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf135Q9CWS1 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf135Q9CWS1 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rnf135Q9CWS1 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rnf135Q9CWS1 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rnf135Q9CWS1 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.15□□□□□ -0.63
Rnf135Q9CWS1 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm14892-201ENSMUST00000117636 267 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm13117-201ENSMUST00000120894 691 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm13022-201ENSMUST00000121181 285 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm16165-201ENSMUST00000160140 795 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm42790-201ENSMUST00000201268 969 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rnf135Q9CWS1 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf135Q9CWS1 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms