Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm14639-201ENSMUST00000120850 866 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm9574-201ENSMUST00000173127 845 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm37009-201ENSMUST00000193297 361 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm42803-201ENSMUST00000201051 451 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-1Q99MA9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Mir598-201ENSMUST00000102094 79 ntBASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Gm23432-201ENSMUST00000157181 131 ntBASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-1Q99MA9 Platr10-202ENSMUST00000191479 818 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms