Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm17836-201ENSMUST00000191976 1302 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 AC166361.2-201ENSMUST00000219269 1415 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm22495-201ENSMUST00000104492 126 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm16209-201ENSMUST00000118457 627 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm11952-201ENSMUST00000121172 821 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm12745-201ENSMUST00000121767 214 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm10171-201ENSMUST00000126220 628 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm23582-201ENSMUST00000158530 139 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm7928-201ENSMUST00000181249 701 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm5254-201ENSMUST00000188353 977 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm6439-201ENSMUST00000199849 862 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm42689-201ENSMUST00000202403 404 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm44008-201ENSMUST00000204345 412 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm6518-201ENSMUST00000208450 342 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm10233-201ENSMUST00000089275 628 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.45□□□□□ -0.9
Scrt1Q99M85 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms