Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.5□□□□□ -0.89
Thumpd1Q99J36 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm11824-201ENSMUST00000120191 846 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm13284-201ENSMUST00000121020 547 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm7584-201ENSMUST00000175829 940 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm27552-201ENSMUST00000183351 62 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm27844-201ENSMUST00000183613 62 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm6677-201ENSMUST00000195100 441 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm5881-201ENSMUST00000204737 367 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 AC124581.2-201ENSMUST00000225459 282 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Thumpd1Q99J36 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.48□□□□□ -0.89
Thumpd1Q99J36 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms