Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdhb18Q91Y02 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Pcdhb18Q91Y02 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Mir1249-201ENSMUST00000116791 98 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm12028-201ENSMUST00000118065 436 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm12337-201ENSMUST00000119634 400 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm6439-201ENSMUST00000199849 862 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm7238-201ENSMUST00000206467 973 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm6331-201ENSMUST00000217890 450 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdhb18Q91Y02 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm8152-201ENSMUST00000120842 637 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm16441-201ENSMUST00000138176 924 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm6038-201ENSMUST00000154310 948 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm20493-201ENSMUST00000173706 213 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Mir8111-201ENSMUST00000184463 137 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm27316-201ENSMUST00000184884 277 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Pcdhb18Q91Y02 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms