Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm6755-201ENSMUST00000100598 864 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm6740-201ENSMUST00000100617 864 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm26313-201ENSMUST00000157770 308 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm2345-201ENSMUST00000193451 589 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm44640-201ENSMUST00000206894 247 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm45893-201ENSMUST00000211899 247 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 AC154213.1-201ENSMUST00000228234 583 ntBASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc17Q8CE13 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm6794-201ENSMUST00000203829 457 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm44605-201ENSMUST00000206892 949 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm7904-201ENSMUST00000217049 465 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm6331-201ENSMUST00000217890 450 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm6564-201ENSMUST00000075377 619 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc17Q8CE13 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc17Q8CE13 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc17Q8CE13 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc17Q8CE13 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.21□□□□□ -0.61
Ccdc17Q8CE13 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Ccdc17Q8CE13 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Ccdc17Q8CE13 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.21□□□□□ -0.61
Ccdc17Q8CE13 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc17Q8CE13 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc17Q8CE13 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms