Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm11473-201ENSMUST00000118980 359 ntBASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm6630-201ENSMUST00000119199 454 ntBASIC13.16□□□□□ -0.3
Trim52Q8CDV4 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm26174-201ENSMUST00000158415 219 ntBASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm42511-201ENSMUST00000196160 234 ntBASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm44236-201ENSMUST00000204492 513 ntBASIC13.16□□□□□ -0.3
Trim52Q8CDV4 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 AC163638.2-201ENSMUST00000224920 827 ntBASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm8730-201ENSMUST00000076373 954 ntBASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm7052-201ENSMUST00000167568 1512 ntBASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim52Q8CDV4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 AC130671.3-201ENSMUST00000227393 1897 ntBASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Gm12377-201ENSMUST00000118656 252 ntBASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Gm15815-201ENSMUST00000120569 255 ntBASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Gm11736-201ENSMUST00000121468 505 ntBASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Gm23081-201ENSMUST00000157845 297 ntBASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 AC118639.1-202ENSMUST00000226957 653 ntBASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim52Q8CDV4 AC154186.1-201ENSMUST00000227711 1597 ntBASIC13.15□□□□□ -0.3
Trim52Q8CDV4 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Gm11929-201ENSMUST00000118175 945 ntBASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Gm12435-201ENSMUST00000118949 1016 ntBASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Gm14633-201ENSMUST00000121152 470 ntBASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Gm14699-201ENSMUST00000122340 228 ntBASIC13.14□□□□□ -0.31
Trim52Q8CDV4 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim52Q8CDV4 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms