Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rad54bQ6PFE3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rad54bQ6PFE3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Rad54bQ6PFE3 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rad54bQ6PFE3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rad54bQ6PFE3 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rad54bQ6PFE3 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rad54bQ6PFE3 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC10.77□□□□□ -0.68
Rad54bQ6PFE3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Rad54bQ6PFE3 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rad54bQ6PFE3 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rad54bQ6PFE3 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.77□□□□□ -0.68
Rad54bQ6PFE3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Gm44420-201ENSMUST00000203669 490 ntBASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Gm7880-201ENSMUST00000203748 871 ntBASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rad54bQ6PFE3 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm25766-201ENSMUST00000104101 131 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm11988-201ENSMUST00000122321 1069 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm20392-201ENSMUST00000173047 701 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm5881-201ENSMUST00000204737 367 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm18561-201ENSMUST00000206027 804 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm9132-201ENSMUST00000210182 832 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Gm7357-201ENSMUST00000195361 2991 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rad54bQ6PFE3 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rad54bQ6PFE3 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms