Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Gm7278-201ENSMUST00000119836 1401 ntBASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Gm44056-201ENSMUST00000204623 1427 ntBASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Nhlrc4Q3UP44 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm45719-201ENSMUST00000207954 1662 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm12397-201ENSMUST00000117674 615 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm12628-201ENSMUST00000122193 382 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm4430-202ENSMUST00000193902 1041 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm43564-201ENSMUST00000196185 211 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm43969-201ENSMUST00000204833 535 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm14005-210ENSMUST00000225087 1413 ntBASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc4Q3UP44 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm22937-201ENSMUST00000103954 131 ntBASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm8482-201ENSMUST00000117972 471 ntBASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm13841-201ENSMUST00000118829 483 ntBASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm11449-201ENSMUST00000119175 476 ntBASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm15136-201ENSMUST00000120552 533 ntBASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc4Q3UP44 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms