Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 AC154575.1-201ENSMUST00000227166 1474 ntBASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Gm12420-201ENSMUST00000119869 1048 ntBASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Gm26208-201ENSMUST00000158677 124 ntBASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Gm6378-201ENSMUST00000084199 444 ntBASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Dcstamp-205ENSMUST00000228556 1684 ntBASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b2Q3UJB0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Gm38348-201ENSMUST00000191718 2273 ntBASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Gm12011-201ENSMUST00000119734 618 ntBASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Mir6981-201ENSMUST00000184293 115 ntBASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Gm18122-201ENSMUST00000211390 904 ntBASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 AC123698.1-201ENSMUST00000227090 402 ntBASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 AU015228-201ENSMUST00000121103 1320 ntBASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b2Q3UJB0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Gm13792-201ENSMUST00000121350 423 ntBASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Gm12424-201ENSMUST00000179673 447 ntBASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Gm17764-201ENSMUST00000185925 391 ntBASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC13.86□□□□□ -0.19
Sf3b2Q3UJB0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms