Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Smarcc1P97496 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm11235-201ENSMUST00000117763 333 ntBASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm16518-201ENSMUST00000117960 508 ntBASIC13.44□□□□□ -0.26
Smarcc1P97496 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm26208-201ENSMUST00000158677 124 ntBASIC13.44□□□□□ -0.26
Smarcc1P97496 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm26532-201ENSMUST00000180630 690 ntBASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm38103-201ENSMUST00000191707 864 ntBASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcc1P97496 AC130217.1-201ENSMUST00000224146 909 ntBASIC13.44□□□□□ -0.26
Smarcc1P97496 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Smarcc1P97496 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Smarcc1P97496 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.44□□□□□ -0.26
Smarcc1P97496 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Smarcc1P97496 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Smarcc1P97496 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcc1P97496 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Gm5501-201ENSMUST00000165917 832 ntBASIC13.43□□□□□ -0.26
Smarcc1P97496 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC13.43□□□□□ -0.26
Smarcc1P97496 Gm17797-201ENSMUST00000182175 997 ntBASIC13.43□□□□□ -0.26
Smarcc1P97496 Gm28391-201ENSMUST00000185202 379 ntBASIC13.43□□□□□ -0.26
Smarcc1P97496 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Gm29528-201ENSMUST00000186699 379 ntBASIC13.43□□□□□ -0.26
Smarcc1P97496 Gm29526-201ENSMUST00000187217 379 ntBASIC13.43□□□□□ -0.26
Smarcc1P97496 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC13.43□□□□□ -0.26
Smarcc1P97496 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Smarcc1P97496 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.43□□□□□ -0.26
Smarcc1P97496 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smarcc1P97496 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.43□□□□□ -0.26
Smarcc1P97496 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc1P97496 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Smarcc1P97496 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm37422-201ENSMUST00000193794 4718 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm7061-201ENSMUST00000118127 1416 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm11929-201ENSMUST00000118175 945 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm15132-201ENSMUST00000118581 652 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm14650-201ENSMUST00000120400 889 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm22994-201ENSMUST00000175422 82 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms