Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm43274-201ENSMUST00000202545 5000 ntBASIC8.95□□□□□ -0.98
Npas1P97459 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Gm13916-201ENSMUST00000117368 628 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Gm8111-201ENSMUST00000117659 987 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Gm14740-201ENSMUST00000118538 1150 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Gm14723-201ENSMUST00000118686 215 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Gm12196-201ENSMUST00000120954 262 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.95□□□□□ -0.98
Npas1P97459 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC8.95□□□□□ -0.98
Npas1P97459 Gm22846-201ENSMUST00000157706 270 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Gm25226-201ENSMUST00000158198 123 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC8.95□□□□□ -0.98
Npas1P97459 Gm25890-201ENSMUST00000177643 165 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Rnu1b2-201ENSMUST00000178073 165 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Rnu1b1-201ENSMUST00000178250 165 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Gm22614-201ENSMUST00000178300 165 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC8.95□□□□□ -0.98
Npas1P97459 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC8.95□□□□□ -0.98
Npas1P97459 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Npas1P97459 Gm42867-201ENSMUST00000202995 469 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Gm19208-201ENSMUST00000213861 912 ntBASIC8.95□□□□□ -0.98
Npas1P97459 AC153962.4-201ENSMUST00000217878 242 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Npas1P97459 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Npas1P97459 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Npas1P97459 Gm22042-201ENSMUST00000082989 165 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Mir219a-1-201ENSMUST00000083621 110 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Gm26110-201ENSMUST00000083971 165 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Meis2-203ENSMUST00000102538 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Meis2-201ENSMUST00000028639 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC8.95□□□□□ -0.98
Npas1P97459 Slc22a21-201ENSMUST00000076493 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Npas1P97459 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Gm3765-201ENSMUST00000130985 1447 ntBASIC8.95□□□□□ -0.98
Npas1P97459 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC8.95□□□□□ -0.98
Npas1P97459 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Pard3b-201ENSMUST00000046673 3426 ntTSL 5 BASIC8.95□□□□□ -0.98
Npas1P97459 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Npas1P97459 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
Npas1P97459 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Npas1P97459 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Gm31135-201ENSMUST00000208460 1782 ntTSL 5 BASIC8.94□□□□□ -0.98
Npas1P97459 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Npas1P97459 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC8.94□□□□□ -0.98
Npas1P97459 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC8.94□□□□□ -0.98
Npas1P97459 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Gm8199-201ENSMUST00000121323 823 ntBASIC8.94□□□□□ -0.98
Npas1P97459 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC8.94□□□□□ -0.98
Npas1P97459 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC8.94□□□□□ -0.98
Npas1P97459 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC8.94□□□□□ -0.98
Npas1P97459 Gm28746-201ENSMUST00000187453 380 ntBASIC8.94□□□□□ -0.98
Npas1P97459 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Gm44364-201ENSMUST00000198368 141 ntBASIC8.94□□□□□ -0.98
Npas1P97459 Gm9678-201ENSMUST00000198979 1149 ntBASIC8.94□□□□□ -0.98
Npas1P97459 Gm5302-201ENSMUST00000202130 796 ntBASIC8.94□□□□□ -0.98
Npas1P97459 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 AC154461.3-201ENSMUST00000224831 573 ntBASIC8.94□□□□□ -0.98
Npas1P97459 AC118639.2-201ENSMUST00000226289 223 ntBASIC8.94□□□□□ -0.98
Npas1P97459 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Npas1P97459 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms